Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9608174 chr22:24052031 C/T IGLL3 chr22:25713888-25716191:+ -0.34 -6.74 4.48E-11 Box Plot
THCA rs9612403 chr22:24055402 C/A IGLL3 chr22:25713888-25716191:+ -0.42 -7.86 2.48E-14 Box Plot
THCA rs9615659 chr22:48271008 C/T CDK17 chr12:96672039-96794338:- 0.25 6.29 7.22E-10 Box Plot
THCA rs9620232 chr22:23597992 A/G POM121L10P chr22:25053448-25054732:- 0.34 6.09 2.34E-9 Box Plot
THCA rs9620294 chr22:23982792 T/C IGLL3 chr22:25713888-25716191:+ 0.72 10.27 1.75E-22 Box Plot
THCA rs9621566 chr22:33187010 C/T ACO2 chr22:41865129-41924993:+ -0.47 -6.22 1.08E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T ADSL chr22:40742504-40786467:+ -0.53 -6.31 6.39E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T ALG12 chr22:50293877-50312106:- -0.46 -6 3.82E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T ANKRD54 chr22:38226862-38245334:- -0.58 -7.43 5.0E-13 Box Plot
THCA rs9621566 chr22:33187010 C/T AP1B1 chr22:29723669-29819168:- -0.62 -6.68 6.78E-11 Box Plot
THCA rs9621566 chr22:33187010 C/T ASCC2 chr22:30184597-30234293:- -0.49 -5.92 6.01E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T ATXN10 chr22:46067678-46241187:+ -0.59 -6.7 5.74E-11 Box Plot
THCA rs9621566 chr22:33187010 C/T C22orf30 chr22:32072242-32146120:- -0.5 -7.53 2.62E-13 Box Plot
THCA rs9621566 chr22:33187010 C/T C22orf32 chr22:42475699-42480287:+ -0.51 -6.7 5.84E-11 Box Plot
THCA rs9621566 chr22:33187010 C/T C22orf40 chr22:46639911-46646193:- -0.48 -6.59 1.17E-10 Box Plot